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Resources

These databases represent resources invoving members of the Feedstocks Division at JBEI.

Rice Kinase Database

RKD

The Rice Kinase Database was created to host functional genomic information gathered as part of a large NSF funded rice kinase proteomics project. Our goal is to integrate disparate data sets into a logical, user friendly format. To accomplish this, we have developed a platform to display user selected functional genomic data on a phylogenetic tree.

Maintained and hosted by the Ronald Lab, UC Davis.

SUBA: Arabidopsis SubCellular Proteomic Database

SUBA logo

The SubCellular Proteomic Database (SUBA) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations.

Maintained and hosted by Plant Energy Biology, UWA.

ARAMEMNON: The Plant Membrane Protein Database

Aramemnon Logo

ARAMEMNON is a database about all putative membrane proteins of Arabidopsis, rice and about some 4800 putative membrane proteins of ~270 other seed plants.

Maintained and hosted by the Flügge Lab, Botanical Institute, University of Cologne.

PhosPhAt: The Arabidopsis Protein Phosphorylation Site Database

ProsPhAt Logo

The Arabidopsis Protein Phosphorylation Site Database contains information on Arabidopsis phosphorylation sites which were identified by mass spectrometry in large scale experiments from different research groups.

Maintained and hosted by the Shulze Lab, MPIMP, Golm-Potsdam.

DOE BioEnergy Research Centers